View organizations and update users with the Clerk MCP server

Five new Clerk MCP server tools let your agent inspect organizations and memberships and update existing users in your application's development or production instance.

• list_organizations: List or search organizations with filters and pagination.
• list_organization_memberships: List an organization's members with their roles and permissions.
• list_user_organization_memberships: List the organizations a user belongs to, with their role and permissions in each.
• update_user: Update a user's first or last name, username, external ID, locale, or timezone. You can also set whether they bypass Device Trust (bypass_client_trust).
• update_user_metadata: Add or change a user's public, private, or unsafe metadata.

Existing connections may not have the new organizations:read permission. Ask your agent to run whoami to check. If the permission is missing, sign out of the Clerk MCP server and connect again.

See the Clerk MCP server guide for setup instructions and the full tool list.